RNAJunction Database - Junction Profile:10389
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 10389: 2CKY_j2_B-G10_B-C26

Primary Citation: (from PDB entry 2CKY)

S.THORE M.LEIBUNDGUT N.BAN STRUCTURE OF THE EUKARYOTIC THIAMINE PYROPHOSPHATE RIBOSWITCH WITH ITS REGULATORY LIGAND. SCIENCE V. 312 1208 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:2CKY j2 B-G10 B-C26 
NC-IUBMB Classification:HS2HS9Cluster Page
Angles: 172°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.77563Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: GGCUGAGAAAGUCCC 15nt

Strand 2: Chain B: GGGGUGCU 8nt

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