#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 9:74:78:78:86:138
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = 0
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = 0
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = 0
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = 0
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = 0
H1_OUTSEQ_CHAR = 0
# Position:
H1_P_X = 45.522938793958524
H1_P_Y = 127.11858932197607
H1_P_Z = 37.15410289099698
# Orientation:
H1_DX_X = -0.1771430859717782
H1_DX_Y = -0.9392693356543305
H1_DX_Z = 0.293927613864156
H1_DY_X = -0.5798155054752314
H1_DY_Y = -0.14172267371439773
H1_DY_Z = -0.8023270301851682
H1_DZ_X = 0.795257383934846
H1_DZ_Y = -0.3125504740913527
H1_DZ_Z = -0.5194977328558537
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = 0
H2_OUTSEQ_CHAR = 0
# Position:
H2_P_X = 63.47208908964254
H2_P_Y = 144.07901227801204
H2_P_Z = 55.786987278987034
# Orientation:
H2_DX_X = -0.6464055312210206
H2_DX_Y = 0.4165351938218578
H2_DX_Z = 0.6392638903572561
H2_DY_X = 0.23844595597709883
H2_DY_Y = -0.6855896450875889
H2_DY_Z = 0.6878301858939082
H2_DZ_X = 0.7247781835051654
H2_DZ_Y = 0.5970471261604757
H2_DZ_Z = 0.34384780624352373
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = 0
H3_OUTSEQ_CHAR = 0
# Position:
H3_P_X = 25.398020974641277
H3_P_Y = 171.41539501513884
H3_P_Z = 66.19392365412202
# Orientation:
H3_DX_X = -0.7171971013157332
H3_DX_Y = 0.6838533879874831
H3_DX_Z = -0.1340629016631283
H3_DY_X = -0.34543708190094335
H3_DY_Y = -0.18179248000569714
H3_DY_Z = 0.9206653662765518
H3_DZ_X = 0.6052285025608697
H3_DZ_Y = 0.7066088295170232
H3_DZ_Z = 0.3666093584955519
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = 0
H4_OUTSEQ_CHAR = 0
# Position:
H4_P_X = 27.959577944016754
H4_P_Y = 141.7304034329517
H4_P_Z = 69.06834528475424
# Orientation:
H4_DX_X = -0.749341902326389
H4_DX_Y = -0.6507984736585115
H4_DX_Z = -0.12226225951467029
H4_DY_X = 0.6063105650448435
H4_DY_Y = -0.7485488689169699
H4_DY_Z = 0.2684438294283069
H4_DZ_X = -0.2662221105259164
H4_DZ_Y = 0.1270273101615942
H4_DZ_Z = 0.9555050237127176
#############  END of Description of junction: j1