############# Start of Description of junction: j55 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS1HS6HS2 FINGERPRINT = 20:47:63:147:149:160 LOOP_LENGTH_SUM = 9 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1945 S1_NAME_ID3 = 1948 S1_NUM_ID5_ORIG = 1945 S1_NUM_ID3_ORIG = 1948 S1_NAME2_ID5 = 1946 S1_NAME2_ID3 = 1947 S1_NUM2_ID5_ORIG = 1946 S1_NUM2_ID3_ORIG = 1947 S1_SQ2 = CG S1_SQLEN2 = 2 S1_SQ = GCGG S1_SQLEN = 4 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 1888 S2_NAME_ID3 = 1892 S2_NUM_ID5_ORIG = 1888 S2_NUM_ID3_ORIG = 1892 S2_NAME2_ID5 = 1889 S2_NAME2_ID3 = 1891 S2_NUM2_ID5_ORIG = 1889 S2_NUM2_ID3_ORIG = 1891 S2_SQ2 = CUG S2_SQLEN2 = 3 S2_SQ = CCUGC S2_SQLEN = 5 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1964 S3_NAME_ID3 = 1973 S3_NUM_ID5_ORIG = 1964 S3_NUM_ID3_ORIG = 1973 S3_NAME2_ID5 = 1965 S3_NAME2_ID3 = 1972 S3_NUM2_ID5_ORIG = 1965 S3_NUM2_ID3_ORIG = 1972 S3_SQ2 = CUUAAGGU S3_SQLEN2 = 8 S3_SQ = UCUUAAGGUA S3_SQLEN = 10 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 2009 S4_NAME_ID3 = 2014 S4_NUM_ID5_ORIG = 2009 S4_NUM_ID3_ORIG = 2014 S4_NAME2_ID5 = 2010 S4_NAME2_ID3 = 2013 S4_NUM2_ID5_ORIG = 2010 S4_NUM2_ID3_ORIG = 2013 S4_SQ2 = AAUG S4_SQLEN2 = 4 S4_SQ = GAAUGG S4_SQLEN = 6 S4_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 5 H1_INID2 = 2 H1_OUTID2 = 4 H1_INID2_ORIG = 1946 H1_OUTID2_ORIG = 1891 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 115.01751702366454 H1_P_Y = 113.66346461401824 H1_P_Z = 88.73578355826176 # Orientation: H1_DX_X = 0.7293577057373426 H1_DX_Y = -0.49824885174774636 H1_DX_Z = 0.4688127758643361 H1_DY_X = -0.5593501683486437 H1_DY_Y = -0.8288624916254577 H1_DY_Z = -0.010693883521724956 H1_DZ_X = 0.3939095406941817 H1_DZ_Y = -0.2544308387528815 H1_DZ_Z = -0.8832328243683065 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 4 H2_INID2 = 2 H2_OUTID2 = 3 H2_INID2_ORIG = 1965 H2_OUTID2_ORIG = 1947 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 117.20316204508684 H2_P_Y = 99.25407248593952 H2_P_Z = 103.37111111134111 # Orientation: H2_DX_X = -0.9790823961741779 H2_DX_Y = -0.17727779687209022 H2_DX_Z = 0.09985111034932004 H2_DY_X = 0.18349834701292878 H2_DY_Y = -0.9813699076518532 H2_DY_Z = 0.056933830003984554 H2_DZ_X = 0.08789777099184448 H2_DZ_Y = 0.0740654244001746 H2_DZ_Z = 0.9933721834051426 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 10 H3_INID2 = 2 H3_OUTID2 = 9 H3_INID2_ORIG = 2010 H3_OUTID2_ORIG = 1972 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 113.21005823108028 H3_P_Y = 112.25862697293726 H3_P_Z = 104.88584220425949 # Orientation: H3_DX_X = 0.869101064745351 H3_DX_Y = 0.47600746343086087 H3_DX_Z = -0.13446276070582996 H3_DY_X = -0.4905245984661377 H3_DY_Y = 0.7944520033369002 H3_DY_Z = -0.3580944466109628 H3_DZ_X = -0.06363141958300389 H3_DZ_Y = 0.3771775565328568 H3_DZ_Z = 0.9239524518554845 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1889 H4_OUTID2_ORIG = 2013 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 114.26680561471727 H4_P_Y = 129.20067522702007 H4_P_Z = 92.82479797249978 # Orientation: H4_DX_X = -0.30000226000622376 H4_DX_Y = -0.8317979383776049 H4_DX_Z = 0.4670233759694469 H4_DY_X = 0.6449501098005612 H4_DY_Y = 0.1838672676956037 H4_DY_Z = 0.7417763704367957 H4_DZ_X = -0.7028783677560426 H4_DZ_Y = 0.523741365161186 H4_DZ_Z = 0.48130757583867023 ############# END of Description of junction: j55