############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 31:40:41:42:63:64:65:75:93:100:101:104:119:123:130:132:135:142:142:155:165 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = 0 ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = 0 ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 58.00735817717255 H1_P_Y = 91.51610413964066 H1_P_Z = 80.87427571976792 # Orientation: H1_DX_X = 0.13737264354667644 H1_DX_Y = -0.9880433122917651 H1_DX_Z = 0.06999407003824842 H1_DY_X = 0.23147381083191476 H1_DY_Y = -0.036685142977148644 H1_DY_Z = -0.9721492041778816 H1_DZ_X = 0.9630932622046231 H1_DZ_Y = 0.14974850022710484 H1_DZ_Z = 0.223666615693503 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 41.08711189905214 H2_P_Y = 84.05107347424763 H2_P_Z = 70.89802644168775 # Orientation: H2_DX_X = -0.43762233626949154 H2_DX_Y = 0.4346543300374037 H2_DX_Z = 0.7871228012056122 H2_DY_X = -0.3617984557385654 H2_DY_Y = 0.7162849984137551 H2_DY_Z = -0.596688929403399 H2_DZ_X = -0.8231576812635666 H2_DZ_Y = -0.5459042172644644 H2_DZ_Z = -0.15620504905301402 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 47.638424222254415 H3_P_Y = 89.98257835076974 H3_P_Z = 97.90273675868595 # Orientation: H3_DX_X = -0.19520279573659138 H3_DX_Y = 0.9187534787711087 H3_DX_Z = 0.3432024384858039 H3_DY_X = -0.7589994781400122 H3_DY_Y = -0.363135361854674 H3_DY_Z = 0.5404188201329418 H3_DZ_X = 0.6211406126794543 H3_DZ_Y = -0.15499920714847804 H3_DZ_Z = 0.7682184487914441 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 33.15663771799018 H4_P_Y = 102.09869458432448 H4_P_Z = 103.80557478885561 # Orientation: H4_DX_X = -0.980751555478065 H4_DX_Y = 0.1755686697181318 H4_DX_Z = 0.08545190835071992 H4_DY_X = -0.03940884790021926 H4_DY_Y = -0.6066070530158072 H4_DY_Z = 0.7940244492071145 H4_DZ_X = 0.19124154657015424 H4_DZ_Y = 0.7753731523885108 H4_DZ_Z = 0.6018497698101726 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 12.196032272496836 H5_P_Y = 97.55423207379755 H5_P_Z = 93.92452366019182 # Orientation: H5_DX_X = -0.12349067765491739 H5_DX_Y = 0.9353878352462743 H5_DX_Z = -0.3313603027002614 H5_DY_X = -0.9760904251133482 H5_DY_Y = -0.05430473749061093 H5_DY_Z = 0.21047203493127142 H5_DZ_X = 0.17887854688129146 H5_DZ_Y = 0.3494289529494665 H5_DZ_Z = 0.919729238583983 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = 0 H6_OUTSEQ_CHAR = 0 # Position: H6_P_X = 10.265902534276911 H6_P_Y = 90.28311237731798 H6_P_Z = 72.88925298847612 # Orientation: H6_DX_X = 0.7053958516162915 H6_DX_Y = -0.6611629438156399 H6_DX_Z = 0.2555000083122536 H6_DY_X = -0.7053141910400988 H6_DY_Y = -0.6905005606352859 H6_DY_Z = 0.16043960757802722 H6_DZ_X = 0.07034617573102331 H6_DZ_Y = -0.29338121529399075 H6_DZ_Z = -0.9534038378738785 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = 0 H7_OUTSEQ_CHAR = 0 # Position: H7_P_X = 30.97227145854387 H7_P_Y = 100.08138096125053 H7_P_Z = 77.41200028178248 # Orientation: H7_DX_X = 0.9600555849361889 H7_DX_Y = -0.23851763584777075 H7_DX_Z = -0.1462963130855286 H7_DY_X = -0.2771413091098829 H7_DY_Y = -0.8826059510310387 H7_DY_Z = -0.379736000386373 H7_DZ_X = -0.03854826348474916 H7_DZ_Y = 0.4051124196987388 H7_DZ_Z = -0.9134538624299182 ############# END of Description of junction: j13