#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 10:75:77:79:86:139
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = 0
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = 0
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = 0
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = 0
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = 0
H1_OUTSEQ_CHAR = 0
# Position:
H1_P_X = 45.622257498943
H1_P_Y = 127.16756736251217
H1_P_Z = 37.05959419753532
# Orientation:
H1_DX_X = -0.1927314826447457
H1_DX_Y = -0.9354143627950862
H1_DX_Z = 0.2964026745396069
H1_DY_X = -0.5945010694974187
H1_DY_Y = -0.1290012837891794
H1_DY_Z = -0.7936794990090021
H1_DZ_X = 0.7806555283631695
H1_DZ_Y = -0.3291787336044365
H1_DZ_Z = -0.5312422304171633
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = 0
H2_OUTSEQ_CHAR = 0
# Position:
H2_P_X = 63.57309118733089
H2_P_Y = 144.24294449453959
H2_P_Z = 55.996741814524576
# Orientation:
H2_DX_X = -0.6381043653647396
H2_DX_Y = 0.42164209500973016
H2_DX_Z = 0.6442365734869995
H2_DY_X = 0.242205662689166
H2_DY_Y = -0.6843228190593607
H2_DY_Z = 0.6877780865046219
H2_DZ_X = 0.7308619814053685
H2_DZ_Y = 0.5949119456108178
H2_DZ_Z = 0.33454527512099475
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = 0
H3_OUTSEQ_CHAR = 0
# Position:
H3_P_X = 25.471985940825846
H3_P_Y = 171.52733302514412
H3_P_Z = 66.08654731912198
# Orientation:
H3_DX_X = -0.7136324963283407
H3_DX_Y = 0.682644792592896
H3_DX_Z = -0.1572410484891833
H3_DY_X = -0.34161046969048314
H3_DY_Y = -0.14315959271473844
H3_DY_Z = 0.928874382256069
H3_DZ_X = 0.6115806955602956
H3_DZ_Y = 0.7165901326138737
H3_DZ_Z = 0.33536194575179934
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = 0
H4_OUTSEQ_CHAR = 0
# Position:
H4_P_X = 27.924900551973007
H4_P_Y = 141.9071907909296
H4_P_Z = 69.0841270652931
# Orientation:
H4_DX_X = -0.7732401430818356
H4_DX_Y = -0.6236728578843724
H4_DX_Z = -0.11459427326497007
H4_DY_X = 0.5807584926344198
H4_DY_Y = -0.7690764901809644
H4_DY_Z = 0.2669099576335441
H4_DZ_X = -0.25459625755257065
H4_DZ_Y = 0.13983389642464772
H4_DZ_Z = 0.9568841241503208
#############  END of Description of junction: j1