############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 29:40:42:43:62:64:65:77:92:100:101:105:118:124:130:130:134:143:143:157:164 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = 0 ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = 0 ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 57.816580309946545 H1_P_Y = 91.19747438976353 H1_P_Z = 80.52637684907089 # Orientation: H1_DX_X = 0.12682307982347396 H1_DX_Y = -0.9893266221226185 H1_DX_Z = 0.07175472934605409 H1_DY_X = 0.2344441036836571 H1_DY_Y = -0.04039286029973255 H1_DY_Z = -0.971290059191773 H1_DZ_X = 0.9638214921198056 H1_DZ_Y = 0.14000446991522608 H1_DZ_Z = 0.22681904622783122 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 40.854596769389886 H2_P_Y = 83.27343867802884 H2_P_Z = 70.64149342399394 # Orientation: H2_DX_X = -0.40414633713535153 H2_DX_Y = 0.42479350110431824 H2_DX_Z = 0.8100717373168891 H2_DY_X = -0.35736387665356517 H2_DY_Y = 0.741903403932227 H2_DY_Z = -0.5673362309044876 H2_DZ_X = -0.8419957231739446 H2_DZ_Y = -0.5187772360592788 H2_DZ_Z = -0.14803169087556967 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 47.63920282744904 H3_P_Y = 89.24880639226966 H3_P_Z = 97.94229030470302 # Orientation: H3_DX_X = -0.21380679404224168 H3_DX_Y = 0.9093061907335738 H3_DX_Z = 0.35699986878844925 H3_DY_X = -0.756851916685676 H3_DY_Y = -0.3852473346166363 H3_DY_Z = 0.5279769572434105 H3_DZ_X = 0.617625963695339 H3_DZ_Y = -0.15731097439268638 H3_DZ_Z = 0.7705786308385569 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 33.03912302040126 H4_P_Y = 101.17673397711529 H4_P_Z = 103.91479172137767 # Orientation: H4_DX_X = -0.9810516042593491 H4_DX_Y = 0.17953998412943406 H4_DX_Z = 0.0728226879410272 H4_DY_X = -0.054900693237854625 H4_DY_Y = -0.6180698058536791 H4_DY_Z = 0.7842038185153086 H4_DZ_X = 0.18580544572794366 H4_DZ_Y = 0.7653463981693562 H4_DZ_Z = 0.6162152441696378 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 12.184148893048558 H5_P_Y = 96.73764254033945 H5_P_Z = 94.03623839358576 # Orientation: H5_DX_X = -0.1487895480337773 H5_DX_Y = 0.9300885386993656 H5_DX_Z = -0.3358526173427663 H5_DY_X = -0.9718584729787239 H5_DY_Y = -0.07481336087560919 H5_DY_Z = 0.22336980443641608 H5_DZ_X = 0.18262743193553632 H5_DZ_Y = 0.3596363040831392 H5_DZ_Z = 0.9150458731069477 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = 0 H6_OUTSEQ_CHAR = 0 # Position: H6_P_X = 9.855352381997719 H6_P_Y = 89.97309005944945 H6_P_Z = 72.3015428697052 # Orientation: H6_DX_X = 0.700437755285817 H6_DX_Y = -0.6618585933296259 H6_DX_Z = 0.26707705518423097 H6_DY_X = -0.7092802419799682 H6_DY_Y = -0.6871566276874432 H6_DY_Z = 0.15728098220081677 H6_DZ_X = 0.0794259989361521 H6_DZ_Y = -0.2995980164502754 H6_DZ_Z = -0.950753669060532 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = 0 H7_OUTSEQ_CHAR = 0 # Position: H7_P_X = 30.624086255595376 H7_P_Y = 99.41142720239537 H7_P_Z = 77.38812118657363 # Orientation: H7_DX_X = 0.9635521682453536 H7_DX_Y = -0.21856461656911108 H7_DX_Z = -0.15426187945723768 H7_DY_X = -0.2626096401063869 H7_DY_Y = -0.8827526370206584 H7_DY_Z = -0.38959460822277947 H7_DZ_X = -0.05102348471902829 H7_DZ_Y = 0.4159053861361599 H7_DZ_Z = -0.9079753927227614 ############# END of Description of junction: j13