############# Start of Description of junction: j56 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS1HS6HS2 FINGERPRINT = 19:47:62:148:148:157 LOOP_LENGTH_SUM = 9 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1945 S1_NAME_ID3 = 1948 S1_NUM_ID5_ORIG = 1945 S1_NUM_ID3_ORIG = 1948 S1_NAME2_ID5 = 1946 S1_NAME2_ID3 = 1947 S1_NUM2_ID5_ORIG = 1946 S1_NUM2_ID3_ORIG = 1947 S1_SQ2 = CG S1_SQLEN2 = 2 S1_SQ = GCGG S1_SQLEN = 4 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 1888 S2_NAME_ID3 = 1892 S2_NUM_ID5_ORIG = 1888 S2_NUM_ID3_ORIG = 1892 S2_NAME2_ID5 = 1889 S2_NAME2_ID3 = 1891 S2_NUM2_ID5_ORIG = 1889 S2_NUM2_ID3_ORIG = 1891 S2_SQ2 = CUG S2_SQLEN2 = 3 S2_SQ = CCUGC S2_SQLEN = 5 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1964 S3_NAME_ID3 = 1973 S3_NUM_ID5_ORIG = 1964 S3_NUM_ID3_ORIG = 1973 S3_NAME2_ID5 = 1965 S3_NAME2_ID3 = 1972 S3_NUM2_ID5_ORIG = 1965 S3_NUM2_ID3_ORIG = 1972 S3_SQ2 = CUUAAGGU S3_SQLEN2 = 8 S3_SQ = UCUUAAGGUA S3_SQLEN = 10 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 2009 S4_NAME_ID3 = 2014 S4_NUM_ID5_ORIG = 2009 S4_NUM_ID3_ORIG = 2014 S4_NAME2_ID5 = 2010 S4_NAME2_ID3 = 2013 S4_NUM2_ID5_ORIG = 2010 S4_NUM2_ID3_ORIG = 2013 S4_SQ2 = AAUG S4_SQLEN2 = 4 S4_SQ = GAAUGG S4_SQLEN = 6 S4_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 5 H1_INID2 = 2 H1_OUTID2 = 4 H1_INID2_ORIG = 1946 H1_OUTID2_ORIG = 1891 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 115.09494922397852 H1_P_Y = 113.2955822121665 H1_P_Z = 88.47531801293884 # Orientation: H1_DX_X = 0.714973436154196 H1_DX_Y = -0.501675451547527 H1_DX_Z = 0.4869648107496545 H1_DY_X = -0.5597337699568357 H1_DY_Y = -0.8280818215604029 H1_DY_Z = -0.03128264009176007 H1_DZ_X = 0.41894044011503695 H1_DZ_Y = -0.25020439267883887 H1_DZ_Z = -0.872861197167353 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 4 H2_INID2 = 2 H2_OUTID2 = 3 H2_INID2_ORIG = 1965 H2_OUTID2_ORIG = 1947 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 117.27696593203952 H2_P_Y = 99.28565956711282 H2_P_Z = 103.11103781878401 # Orientation: H2_DX_X = -0.9754142493327294 H2_DX_Y = -0.17931538058100216 H2_DX_Z = 0.1281133735633091 H2_DY_X = 0.1922074297321501 H2_DY_Y = -0.9765983424201465 H2_DY_Z = 0.09649860899503437 H2_DZ_X = 0.10781162346629003 H2_DZ_Y = 0.11875046050145954 H2_DZ_Z = 0.9870536874842486 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 10 H3_INID2 = 2 H3_OUTID2 = 9 H3_INID2_ORIG = 2010 H3_OUTID2_ORIG = 1972 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 113.21040135540817 H3_P_Y = 112.18048364647994 H3_P_Z = 105.04657256479871 # Orientation: H3_DX_X = 0.8660015314829792 H3_DX_Y = 0.47157649376397615 H3_DX_Z = -0.1663038123387821 H3_DY_X = -0.497952717038757 H3_DY_Y = 0.7829272772621465 H3_DY_Z = -0.37291818152593237 H3_DZ_X = -0.04565565751211409 H3_DZ_Y = 0.4057591515272918 H3_DZ_Z = 0.9128390175101941 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1889 H4_OUTID2_ORIG = 2013 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 114.13077877723819 H4_P_Y = 128.94933821306157 H4_P_Z = 92.72533434744679 # Orientation: H4_DX_X = -0.2983590292304257 H4_DX_Y = -0.8331273512695532 H4_DX_Z = 0.4657045267584152 H4_DY_X = 0.6470809499112988 H4_DY_Y = 0.1821124906802254 H4_DY_Z = 0.7403521358111789 H4_DZ_X = -0.701618225204129 H4_DZ_Y = 0.5222392720821176 H4_DZ_Z = 0.4847659319264892 ############# END of Description of junction: j56