############# Start of Description of junction: j52 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS2HS2HS3 FINGERPRINT = 14:19:153:157:168:171 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1843 S1_NAME_ID3 = 1848 S1_NUM_ID5_ORIG = 1843 S1_NUM_ID3_ORIG = 1848 S1_NAME2_ID5 = 1844 S1_NAME2_ID3 = 1847 S1_NUM2_ID5_ORIG = 1844 S1_NUM2_ID3_ORIG = 1847 S1_SQ2 = CAUA S1_SQLEN2 = 4 S1_SQ = ACAUAG S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1827 S2_NAME_ID3 = 1833 S2_NUM_ID5_ORIG = 1827 S2_NUM_ID3_ORIG = 1833 S2_NAME2_ID5 = 1828 S2_NAME2_ID3 = 1832 S2_NUM2_ID5_ORIG = 1828 S2_NUM2_ID3_ORIG = 1832 S2_SQ2 = GACUG S2_SQLEN2 = 5 S2_SQ = GGACUGU S2_SQLEN = 7 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1883 S3_NAME_ID3 = 1886 S3_NUM_ID5_ORIG = 1883 S3_NUM_ID3_ORIG = 1886 S3_NAME2_ID5 = 1884 S3_NAME2_ID3 = 1885 S3_NUM2_ID5_ORIG = 1884 S3_NUM2_ID3_ORIG = 1885 S3_SQ2 = GA S3_SQLEN2 = 2 S3_SQ = UGAA S3_SQLEN = 4 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 2016 S4_NAME_ID3 = 2021 S4_NUM_ID5_ORIG = 2016 S4_NUM_ID3_ORIG = 2021 S4_NAME2_ID5 = 2017 S4_NAME2_ID3 = 2020 S4_NUM2_ID5_ORIG = 2017 S4_NUM2_ID3_ORIG = 2020 S4_SQ2 = UAAC S4_SQLEN2 = 4 S4_SQ = UUAACC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 2 H1_OUTID2 = 6 H1_INID2_ORIG = 1844 H1_OUTID2_ORIG = 1832 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 97.05876830948935 H1_P_Y = 139.79779169135205 H1_P_Z = 91.8173972358259 # Orientation: H1_DX_X = -0.09132923914297919 H1_DX_Y = 0.25019192543749114 H1_DX_Z = -0.9638791265109319 H1_DY_X = -0.41415851295734285 H1_DY_Y = -0.8897849371641939 H1_DY_Z = -0.1917172181643707 H1_DZ_X = -0.9056112279684498 H1_DZ_Y = 0.3816893580408305 H1_DZ_Z = 0.18488249710520677 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 1884 H2_OUTID2_ORIG = 1847 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 110.59301706909307 H2_P_Y = 130.25761249607564 H2_P_Z = 77.89696014377809 # Orientation: H2_DX_X = 0.6606818472666731 H2_DX_Y = 0.5780512168430221 H2_DX_Z = 0.4789115653213969 H2_DY_X = 0.2056998714000997 H2_DY_Y = -0.7529738990024271 H2_DY_Z = 0.6250742918462464 H2_DZ_X = 0.7219328636364111 H2_DZ_Y = -0.314463190417257 H2_DZ_Z = -0.6163812475037957 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 4 H3_INID2 = 2 H3_OUTID2 = 3 H3_INID2_ORIG = 2017 H3_OUTID2_ORIG = 1885 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 113.30794238801609 H3_P_Y = 129.6855495669709 H3_P_Z = 93.28511244381875 # Orientation: H3_DX_X = 0.520681239620373 H3_DX_Y = 0.839611208377903 H3_DX_Z = -0.15473870063308937 H3_DY_X = 0.4928501336608093 H3_DY_Y = -0.14760265770311776 H3_DY_Z = 0.8575034700743203 H3_DZ_X = 0.6971296812343581 H3_DZ_Y = -0.5227489590665755 H3_DZ_Z = -0.49065643105628 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1828 H4_OUTID2_ORIG = 2020 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 103.69456071715697 H4_P_Y = 139.97800194926353 H4_P_Z = 104.11169425691195 # Orientation: H4_DX_X = -0.31174031313832984 H4_DX_Y = 0.46331278798658104 H4_DX_Z = -0.8295536375982664 H4_DY_X = -0.5088238499439086 H4_DY_Y = -0.8187269164835982 H4_DY_Z = -0.2660536148101187 H4_DZ_X = -0.8024439338001628 H4_DZ_Y = 0.3391570384252418 H4_DZ_Z = 0.4909747818309427 ############# END of Description of junction: j52