############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 3 LILLEY = HS2HS4HS4 FINGERPRINT = 39:72:85 LOOP_LENGTH_SUM = 10 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2351 S1_NAME_ID3 = 2358 S1_NUM_ID5_ORIG = 2351 S1_NUM_ID3_ORIG = 2358 S1_NAME2_ID5 = 2352 S1_NAME2_ID3 = 2357 S1_NUM2_ID5_ORIG = 2352 S1_NUM2_ID3_ORIG = 2357 S1_SQ2 = GAAGAG S1_SQLEN2 = 6 S1_SQ = CGAAGAGU S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 2328 S2_NAME_ID3 = 2333 S2_NUM_ID5_ORIG = 2328 S2_NUM_ID3_ORIG = 2333 S2_NAME2_ID5 = 2329 S2_NAME2_ID3 = 2332 S2_NUM2_ID5_ORIG = 2329 S2_NUM2_ID3_ORIG = 2332 S2_SQ2 = CUCA S2_SQLEN2 = 4 S2_SQ = UCUCAG S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 2365 S3_NAME_ID3 = 2372 S3_NUM_ID5_ORIG = 2365 S3_NUM_ID3_ORIG = 2372 S3_NAME2_ID5 = 2366 S3_NAME2_ID3 = 2371 S3_NUM2_ID5_ORIG = 2366 S3_NUM2_ID3_ORIG = 2371 S3_SQ2 = CAAAAG S3_SQLEN2 = 6 S3_SQ = GCAAAAGA S3_SQLEN = 8 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 2 H1_OUTID2 = 5 H1_INID2_ORIG = 2352 H1_OUTID2_ORIG = 2332 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 84.6023089314838 H1_P_Y = 37.956752177788324 H1_P_Z = 107.97599291883694 # Orientation: H1_DX_X = -0.17301210831216451 H1_DX_Y = 0.9600400093035191 H1_DX_Z = 0.21997725090082554 H1_DY_X = -0.44114117105891637 H1_DY_Y = -0.275223815129749 H1_DY_Z = 0.8541933731785747 H1_DZ_X = 0.8806027921680482 H1_DZ_Y = 0.05074477433119995 H1_DZ_Z = 0.47113022648086655 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 2 H2_OUTID2 = 7 H2_INID2_ORIG = 2366 H2_OUTID2_ORIG = 2357 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 75.20943783825416 H2_P_Y = 57.26189588758767 H2_P_Z = 99.36257961327105 # Orientation: H2_DX_X = 0.5415951660939555 H2_DX_Y = -0.531715327622706 H2_DX_Z = -0.6511171065444046 H2_DY_X = -0.7901187564707897 H2_DY_Y = -0.05751296819079954 H2_DY_Z = -0.6102496285643468 H2_DZ_X = 0.28703140374655334 H2_DZ_Y = 0.844968087480801 H2_DZ_Z = -0.4512669990175624 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 2 H3_OUTID2 = 7 H3_INID2_ORIG = 2329 H3_OUTID2_ORIG = 2371 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 78.9789928644705 H3_P_Y = 41.98963404514682 H3_P_Z = 87.38113245855209 # Orientation: H3_DX_X = 0.5822864744442455 H3_DX_Y = 0.29408367450376005 H3_DX_Z = 0.7579295838464475 H3_DY_X = 0.4476853901311415 H3_DY_Y = -0.8941860586418144 H3_DY_Z = 0.0030139664481367845 H3_DZ_X = 0.678616425635596 H3_DZ_Y = 0.3375590095390564 H3_DZ_Z = -0.6523294121351455 ############# END of Description of junction: j4