RNAJunction Database - Junction Profile:6077
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 6077: 1VOU_j2_B-U1005_B-G1165

Primary Citation: (from PDB entry 1VOU)

A.VILA-SANJURJO B.S.SCHUWIRTH C.W.HAU J.H.CATE STRUCTURAL BASIS FOR THE CONTROL OF TRANSLATION INITIATION DURING STRESS. NAT.STRUCT.MOL.BIOL. V. 11 1054 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1NJN j2 0-U1005 0-G1165 
NC-IUBMB Classification:HS5HS6Cluster Page
Angles: 156°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.28616Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: CAUCAGCUAAGG 12nt

Strand 2: Chain B: CCGAAGCUAUG 11nt

Valid XHTML 1.0 Transitional